Resolving chromatin landscapes around nuclear condensates

ORAL

Abstract

Many biomolecular condensates associate with specific chromatin loci in the cell nucleus. Transcription condensates are linked to super-enhancer chromatin domains that are characterized by extended accumulations of transcription factor and coactivator binding sites as well as stereotypic epigenetic marks. Biochemical data and population assays suggest that these chromatin marks are required to maintain transcription condensates in specific locations in the nucleus. Conversely, nuclear condensates have been shown to displace chromatin as they grow. We investigate how functional chromatin elements co-organize spatially with respect to transcription condensates using super-resolution microscopy. Our single cell assays reveal cell-to-cell variability obscured by ensemble data. Our work provides new insights into the complex interplay between biomolecular condensates and chromatin topologies.

*This work was supported in part by NIH grant R21AI159626 (AK and JHS), by a UIC Honors College Research Award (AK), and the College of Liberal Arts and Science at UIC.

Presenters

  • Jan-Hendrik Spille

    • University of Illinois at Chicago

Authors

  • Jan-Hendrik Spille

    • University of Illinois at Chicago
  • Ganesh Pandey

    • Department of Physics, University of Illinois at Chicago
  • Aishwarya Katiki

    • Department of Physics, University of Illinois at Chicago
  • Saurabh Priyadarshi

    • Department of Microbiology and Immunology, University of Illinois at Chicago
  • Filmon Medhanie

    • Department of Physics, University of Illinois at Chicago
  • Amy L Kenter

    • Department of Microbiology and Immunology, University of Illinois at Chicago