Biological Networks and Systems Biology

Presentations

• Boolean modeling of collective effects in complex networks

  ORAL

  March 19, 2009, 8:00 AM – March 19, 2009, 8:12 AM

  Authors

  • Johannes Norrell

    • Duke University Physics Department

  • Joshua Socolar

    • Physics Department, Center for Nonlinear and Complex Systems, and IGSP Center for Systems Biology, Duke University, Durham, North Carolina 27708, USA
    • Department of Physics, Duke University
    • Duke University Physics Department
    • Duke University

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• A Network Model For Sea Urchin Development

  ORAL

  March 19, 2009, 8:12 AM – March 19, 2009, 8:24 AM

  Authors

  • Xinwei Gong

    • Department of Physics, Duke University

  • Xianrui Cheng

    • Computational Biology and Bioinformatics Program, Duke University

  • Joshua Socolar

    • Physics Department, Center for Nonlinear and Complex Systems, and IGSP Center for Systems Biology, Duke University, Durham, North Carolina 27708, USA
    • Department of Physics, Duke University
    • Duke University Physics Department
    • Duke University

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• Achieving optimal growth: lessons from simple metabolic modules

  ORAL

  March 19, 2009, 8:24 AM – March 19, 2009, 8:36 AM

  Authors

  • Sidhartha Goyal

    • Physics

  • Thomas Chen

    • Applied Mathematics

  • Ned Wingreen

    • Molecular Biology, Princeton University

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• Bifurcation in stochastic differential equations with delayed feedback

  ORAL

  March 19, 2009, 8:36 AM – March 19, 2009, 8:48 AM

  Authors

  • Gaudreault Mathieu

    • McGill University

  • Jorge Vinals

    • McGill University

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• Constraints imposed by nonfunctional protein-protein interactions on gene expression and proteome size

  ORAL

  March 19, 2009, 8:48 AM – March 19, 2009, 9:00 AM

  Authors

  • Jingshan Zhang

    • Harvard University

  • Sergei Maslov

    • Brookhaven National Laboratory

  • Eugene Shakhnovich

    • Harvard University, Department of Chemistry and Chemical Biology
    • Harvard University

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• Effect of TNF autocrine signaling on dosage-dependent NF-kappaB response to lipopolysaccharide stimulation

  ORAL

  March 19, 2009, 9:00 AM – March 19, 2009, 9:12 AM

  Authors

  • Jaewook Joo

    • Sandia National Labs

  • Bryan Carson

    • Sandia National Labs

  • Cathy Branda

    • Sandia National Labs

  • Jens Poschet

    • Sandia National Labs

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• Gain control in molecular signaling without feedback

  ORAL

  March 19, 2009, 9:12 AM – March 19, 2009, 9:24 AM

  Authors

  • Ilya Nemenman

    • Los Alamos National Laboratory
    • CCS-3 and CNLS LANL

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• Noise in Random Boolean Networks

  ORAL

  March 19, 2009, 9:24 AM – March 19, 2009, 9:36 AM

  Authors

  • Tiago Peixoto

    • Technische Universitaet Darmstadt

  • Barbara Drossel

    • Technische Universitaet Darmstadt
    • Darmstadt, Technical University

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• The effect of negative autoregulation on eukaryotic gene expression

  ORAL

  March 19, 2009, 9:36 AM – March 19, 2009, 9:48 AM

  Authors

  • Dmitry Nevozhay

    • Dept. of Systems Biology, UT M. D. Anderson Cancer Center

  • Rhys Adams

    • Dept. of Systems Biology, UT M. D. Anderson Cancer Center

  • Kevin Murphy

    • Harvard Medical School

  • Kresimir Josic

    • Dept. of Mathematics, University of Houston

  • G\'abor Bal\'azsi

    • Dept. of Systems Biology, UT M. D. Anderson Cancer Center

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• Cell stimulation with optically manipulated microsources.

  ORAL

  March 19, 2009, 9:48 AM – March 19, 2009, 10:00 AM

  Authors

  • Holger Kress

    • Yale University

  • Jin-Gyu Park

    • Yale University

  • Cecile O. Mejean

    • Yale University

  • Jason Forster

    • Yale University

  • Jason Park

    • Yale University

  • Spencer Walse

    • Yale University

  • Dianqing Wu

    • Yale University

  • Orion Weiner

    • UC San Francisco

  • Tarek Fahmy

    • Yale University

  • Eric R. Dufresne

    • Yale University

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• ABSTRACT WITHDRAWN

  March 19, 2009, 10:00 AM – March 19, 2009, 10:12 AM

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• Determining Regulatory Networks Governing the Differentiation of Embryonic Stem Cells to Pancreatic Lineage

  ORAL

  March 19, 2009, 10:12 AM – March 19, 2009, 10:24 AM

  Authors

  • Ipsita Banerjee

    • University of Pittsburgh

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• Stabilizing Motifs in Autonomous Boolean Networks and the Yeast Cell Cycle Oscillator

  ORAL

  March 19, 2009, 10:24 AM – March 19, 2009, 10:36 AM

  Authors

  • Volkan Sevim

    • Physics Department, Center for Nonlinear and Complex Systems, and IGSP Center for Systems Biology, Duke University, Durham, North Carolina 27708, USA

  • Xinwei Gong

    • Physics Department, Center for Nonlinear and Complex Systems, and IGSP Center for Systems Biology, Duke University, Durham, North Carolina 27708, USA

  • Joshua Socolar

    • Physics Department, Center for Nonlinear and Complex Systems, and IGSP Center for Systems Biology, Duke University, Durham, North Carolina 27708, USA
    • Department of Physics, Duke University
    • Duke University Physics Department
    • Duke University

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• The Transition Pathway from Nonspecific to Specific Complex of DNA with a DNA-Bending Protein

  ORAL

  March 19, 2009, 10:36 AM – March 19, 2009, 10:48 AM

  Authors

  • Serguei Kuznetsov

    • University of Illinois at Chicago

  • Paula Vivas

    • University of Illinois at Chicago

  • Yogambigai Velmurugu

    • University of Illinois at Chicago

  • Anjum Ansari

    • University of Illinois at Chicago

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