Do E. coli care about single molecules?

ORAL

Abstract

Berg and Purcell derived a fundamental limit on how accurately concentration can be sensed from the stochastic arrival of ligand molecules to a cell’s surface by diffusion. However, it has remained unclear to what extent molecule counting noise is a meaningful limitation on sensing accuracy and downstream functions in cells. Answering this question has been challenging, even for E. coli chemotaxis, one of the paper’s original motivations. This is in part because E. coli chemotaxis depends on information the cell “gathers” about the fluctuating, instantaneous time derivative of concentration, not the absolute concentration, as we recently demonstrated. Here, we introduce an information rate that quantifies how much behaviorally-relevant information (in bits) is encoded per unit time by the receptor associated kinases. We show that the stochastic arrival of single particles limits this rate, which in turn limits E. coli’s ability to climb shallow gradients.

*KK acknowledges funding from PRESTO award JPMJPR21E4; BBM from NIH Award R35GM138341 and Simons Investigator Award 624156; and TE from NIH awards R01GM106189 and R01GM138533.

Presenters

  • Henry H Mattingly

    • CCB, Flatiron Institute, Simons Foundation
    • Simons Flatiron Institute

Authors

  • Henry H Mattingly

    • CCB, Flatiron Institute, Simons Foundation
    • Simons Flatiron Institute
  • Keita Kamino

    • Institute of Molecular Biology, Academia Sinica, Taipei, Taiwan
    • Yale University
  • Thierry Emonet

    • MCDB, Physics, QBio Institute, Yale University
    • Yale University
    • Yale university
  • Benjamin B Machta

    • Physics, Qbio Institute, Yale University
    • Yale University