Physics of Proteins I: Structure & Dynamics II
FOCUS · M06 · ID: 46192
Presentations
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Using core packing to assess the quality of NMR structures
ORAL
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Presenters
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Alex T Grigas
- Yale University
Authors
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Alex T Grigas
- Yale University
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Lynne Regan
- University of Edinburgh
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Corey S O'Hern
- Yale University
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Proteins – a celebration of consilience
ORAL
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Publication: [1] T. Škrbić, T. X. Hoang, A. Maritan, A. Giacometti, G. D. Rose and J. R. Banavar, "Building blocks of protein structures: Physics meets biology", Phys. Rev. E 104, 014402 (2021).
[2] T. Škrbić, T. X. Hoang, A. Giacometti, A. Maritan and J. R. Banavar, "Proteins – a celebration of consilience", Intl. J. Mod. Phys. B (2021), accepted for publicationPresenters
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Tatjana Skrbic
- Department of Physics and Institute for Fundamental Science, University of Oregon, Eugene, OR 97403, USA
- University of Oregon
Authors
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Tatjana Skrbic
- Department of Physics and Institute for Fundamental Science, University of Oregon, Eugene, OR 97403, USA
- University of Oregon
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Trinh X Hoang
- Institute of Physics, Vietnam Academy of Science and Technology, 10 Dao Tan, Ba Dinh Hanoi 11108, Vietnam
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Achille Giacometti
- Dipartimento di Scienze Molecolari e Nanosistemi, Università Ca' Foscari di Venezia, Campus Scientifico, Edificio Alfa, via Torino 155, 30170 Venezia Mestre, Italy
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Amos Maritan
- Dipartimento di Fisica e Astronomia, Università di Padova and INFN, via Marzolo 8, 35131 Padova, Italy
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Jayanth R Banavar
- Department of Physics and Institute for Fundamental Science, University of Oregon, Eugene, OR 97403, USA
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Impact of Water-Protein Interactions on Protein Dynamics(Nguyen Q. Vinh, Department of Physics and Center for Soft Matter and Biological Physics, Virginia Tech, Blacksburg, VA 24061)
ORAL · Invited
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Publication: 1. Journal of Physical Chemistry B (2018), 122, 6341–6350; https://doi.org/10.1021/acs.jpcb.8b02872
2. Biophysical Journal (2021), 120; https://doi.org/10.1016/j.bpj.2021.10.016
3. Review of Scientific Instruments (2015) 86, 123105; https://doi.org/10.1063/1.4936986
4. Journal of the American Chemical Society (2011), 133, 8942–8947; https://doi.org/10.1021/ja200566uPresenters
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Vinh Q Nguyen
- Department of Physics and Center for Soft Matter and Biological Physics, Virginia Tech, Blacksburg, Virginia 24061, United States
- Virginia Tech
Authors
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Vinh Q Nguyen
- Department of Physics and Center for Soft Matter and Biological Physics, Virginia Tech, Blacksburg, Virginia 24061, United States
- Virginia Tech
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Atomistic and coarse-grained molecular dynamics study of peptide-lipid membrane dissociation
ORAL
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Presenters
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Ryan Smith
- University of Missouri
Authors
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Ryan Smith
- University of Missouri
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Ioan Kosztin
- University of Missouri
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Photo-Switching in Crystalline OCP
ORAL
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Presenters
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Robert R Thompson
- Markelz Lab
- University at Buffalo, SUNY
Authors
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Robert R Thompson
- Markelz Lab
- University at Buffalo, SUNY
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Andrea G Markelz
- State Univ of NY - Buffalo
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Timothy Lafave
- State Univ of NY - Buffalo
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Deepu K George
- State Univ of NY - Buffalo
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Jeffrey A Mckinney
- State Univ of NY - Buffalo
- State Univ of NY
- Research Foundation of SUNY
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Structural Dynamics of Prefusion Spike Protein of SARS-CoV-2 and its Variants: Insights from Molecular Dynamics
ORAL
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Presenters
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Mortaza Derakhshani Molayousefi
- University of Arkansas
Authors
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Mortaza Derakhshani Molayousefi
- University of Arkansas
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Ugochi Isu
- University of Arkansas
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Mahmoud Moradi
- University of Arkansas
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Temperature Sensitive Contact Analysis Directs Hyperactive Enzyme Design.
ORAL
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Presenters
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Dan Burns
- Iowa State University
Authors
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Dan Burns
- Iowa State University
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Characterizing Hydration Dynamics and Collective motions of Hemoglobin in Aqueous Solutions using High Sensitivity Dielectric Spectroscopy
ORAL
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Presenters
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Ngoc L.H. Hoang
- Department of Physics and Center for Soft Matter and Biological Physics, Virginia Tech, Blacksburg, Virginia 24061, United States
- Virginia Tech
Authors
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Ngoc L.H. Hoang
- Department of Physics and Center for Soft Matter and Biological Physics, Virginia Tech, Blacksburg, Virginia 24061, United States
- Virginia Tech
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Vinh Q Nguyen
- Department of Physics and Center for Soft Matter and Biological Physics, Virginia Tech, Blacksburg, Virginia 24061, United States
- Virginia Tech
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Assignment of Protein Collective Structural Vibrations Steering Conformational Change
ORAL
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Presenters
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Xing Liu
- State Univ of NY - Buffalo
Authors
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Xing Liu
- State Univ of NY - Buffalo
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Andrea G Markelz
- State Univ of NY - Buffalo
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Quality assessment of computational models of protein-protein interfaces
ORAL
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Presenters
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Grace Meng
- Yale University
Authors
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Grace Meng
- Yale University
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Alex T Grigas
- Yale University
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Lynne Regan
- University of Edinburgh
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Corey S O'Hern
- Yale University
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Monte Carlo simulations reveal limitations of the single-reaction-coordinate picture
ORAL
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Presenters
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Sudeep Adhikari
- University of Mississippi
Authors
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Sudeep Adhikari
- University of Mississippi
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Kevin S Beach
- University of Mississippi
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Non-ergodic internal dynamics of a globular protein observed over fourteen orders in time
ORAL
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Presenters
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Liang Hong
- Shanghai Jiao Tong University
- Shanghai Jiao Tong Univ
Authors
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Liang Hong
- Shanghai Jiao Tong University
- Shanghai Jiao Tong Univ
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Jun Li
- Shanghai Jiao Tong Univ
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