Infrared spectral phenotyping accurately predicts neurodegenerative disease class in the absence of overt symptoms
ORAL
Abstract
Although some neurodegenerative diseases can be identified by behavioral characteristics relatively late in disease progression, we currently lack methods to predict who has developed disease before the onset of symptoms, when onset will occur, or the outcome of therapeutics. New biomarkers are needed. Here we describe spectral phenotyping, a new kind of biomarker that makes disease predictions based on chemical rather than biological endpoints in cells. Spectral phenotyping uses Fourier Transform Infrared (FTIR) spectromicroscopy to produce an absorbance signature as a rapid physiological indicator of disease state. FTIR spectromicroscopy has over the past been used in differential diagnoses of manifest disease. Here, we report that the unique FTIR chemical signature accurately predicts disease class in mice with high probability in the absence of brain pathology. In human cells, the FTIR biomarker accurately predicts neurodegenerative disease class using fibroblasts as surrogate cells, an exciting potential for dissease diagnosis particularly for hard to reach brain diseases.
*This work was supported by the Chan Zuckerberg Initiative (CZI), the National Institutes of Health grants NS060115, GM119161, and P01CA092584, the Office of Science, Office of Basic Energy Sciences, of the U.S. Department of Energy under contract No. DE-AC02-05CH11231. This research used resources of the Advanced Light Source, which is a DOE Office of Science User Facility under contract no. DE-AC02-05CH11231. Additional support is acknowledged from LBNL LDRD through contract DE-AC02-05CH11231, and National Science Foundation BIGDATA grant NSF-1613002.
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Publication:Lovergne, L., Ghosh, D., Schuck, R. et al. An infrared spectral biomarker accurately predicts neurodegenerative disease class in the absence of overt symptoms. Sci Rep 11, 15598 (2021). https://doi.org/10.1038/s41598-021-93686-8