Physics of Genome Organization II
FOCUS · S65 ·
Presentations
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Measuring the energetics of transcriptional regulation in living cells using allelic manifolds
Invited
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Presenters
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Justin Kinney
- Cold Spring Harbor Laboratory
Authors
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Justin Kinney
- Cold Spring Harbor Laboratory
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The Influence of Nucleosome Energetics on Chromatin Structure Across Multiple Length-Scales
ORAL
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Presenters
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Joshua Moller
- University of Chicago
Authors
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Joshua Moller
- University of Chicago
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Joshua Lequieu
- Chemical Engineering, University of California Santa Barbara
- University of California, Santa Barbara
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Juan De Pablo
- University of Chicago
- Chemical Eng., University of Chicago
- The Institute for Molecular Engineering, The University of Chicago
- Institute for Molecular Engineering, University of Chicago
- Institute for Molecular Engineering, The University of Chicago
- Institute for Molecular Engineering, Argonne National Laboratory
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Modeling the spreading of epigenetic marks at the Oct4 promoter
ORAL
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Presenters
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Melinda Varga
- Center for Vascular Biology Research and Department of Medicine, Division of Hematology and Oncology, Beth Israel Deaconess Medical Center, Boston, MA
- University of Notre Dame
Authors
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Melinda Varga
- Center for Vascular Biology Research and Department of Medicine, Division of Hematology and Oncology, Beth Israel Deaconess Medical Center, Boston, MA
- University of Notre Dame
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William C. Aird
- Center for Vascular Biology Research and Department of Medicine, Division of Hematology and Oncology, Beth Israel Deaconess Medical Center, Boston, MA
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Erzsébet Ravasz Regan
- Biochemistry and Molecular Biology Program, The College of Wooster, Wooster, OH
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The role of activity from within and outside of the cell nucleus in nuclear blebbing
ORAL
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Presenters
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Kuang Liu
- Department of Physics, Syracuse University
- Physics Department, Syracuse University
- Physics, Syracuse University
Authors
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Kuang Liu
- Department of Physics, Syracuse University
- Physics Department, Syracuse University
- Physics, Syracuse University
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Edward Banigan
- Institute of Medical Engineering & Science, Massachusetts Institute of Technology
- Institute for Medical Engineering&Science, MIT
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Alison E. Patteson
- Institute for Medicine and Engineering, University of Pennsylvania
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J. M. Schwarz
- Physics, Syracuse University
- Physics Department, Syracuse University
- Syracuse University
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Modeling intrinsic biases in high-throughput sequencing data for chromatin accessibility
ORAL
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Presenters
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Chongzhi Zang
- University of Virginia
Authors
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Shengen Hu
- University of Virginia
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Chongzhi Zang
- University of Virginia
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WITHDRAWN ABSTRACT
COFFEE_KLATCH
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The structural consequences of one-sided loop extrusion
ORAL
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Presenters
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Edward Banigan
- Institute of Medical Engineering & Science, Massachusetts Institute of Technology
- Institute for Medical Engineering&Science, MIT
Authors
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Edward Banigan
- Institute of Medical Engineering & Science, Massachusetts Institute of Technology
- Institute for Medical Engineering&Science, MIT
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Aafke van den Berg
- Institute of Medical Engineering & Science, Massachusetts Institute of Technology
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Hugo B Brandao
- Program in Biophysics, Harvard University
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John Frederick Marko
- Northwestern University
- Physics and Astronomy, and Molecular Biosciences, Northwestern University
- Departments of Physics & Astronomy and Molecular Biosciences, Northwestern University
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Leonid Mirny
- IMES, MIT
- Institute of Medical Engineering & Science, Massachusetts Institute of Technology
- Massachusetts Institute of Technology
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Noninvasive imaging of 3D dynamics in the cell nucleus
ORAL
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Presenters
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Yoon Jung
- Massachusetts Institute of Technology
Authors
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Yoon Jung
- Massachusetts Institute of Technology
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Kuan-Chung Su
- Whitehead Institute for Biomedical Research
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William H Bloxham
- Massachusetts Institute of Technology
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Iain M. Cheeseman
- Whitehead Institute for Biomedical Research
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Nikta Fakhri
- Massachusetts Institute of Technology
- Physics, Massachusetts Institute of Technology
- Department of Physics, Massachusetts Institute of Technology, Cambridge, MA 02144
- Massachusetts Inst of Tech-MIT
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Interplay of Loop Extrusion, Compartmentalization and Global Chromosome Dynamics Across Conditions and the Cell Cycle
ORAL
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Presenters
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Johannes Nuebler
- IMES, MIT
Authors
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Johannes Nuebler
- IMES, MIT
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Geoffrey Fudenberg
- Gladstone Institutes, USCF
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Maxim Imakaev
- IMES, MIT
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Nezar Abdennur
- IMES, MIT
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Leonid Mirny
- IMES, MIT
- Institute of Medical Engineering & Science, Massachusetts Institute of Technology
- Massachusetts Institute of Technology
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A microscopic theory for chromosome congression in <i>C. elegans</i> mitotic spindle
ORAL
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Presenters
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Ehssan Nazockdast
- University of North Carolina at Chapel Hill
Authors
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Ehssan Nazockdast
- University of North Carolina at Chapel Hill
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Michael John Shelley
- Flatiron Institute
- Center for Computational Biology, Flatiron Institute
- Courant Institute / Flatiron Institute
- CCB, Flatiron Institute
- New York University
- New York University - Courant Institute, Flatiron Institute
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Stephanie Redemann
- University of Virginia
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Optimizing chromosome disentanglement via chromatin loop organization
ORAL
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Presenters
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Sumitabha Brahmachari
- Center for Theoretical Biological Physics, Rice University
Authors
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Sumitabha Brahmachari
- Center for Theoretical Biological Physics, Rice University
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John Frederick Marko
- Northwestern University
- Physics and Astronomy, and Molecular Biosciences, Northwestern University
- Departments of Physics & Astronomy and Molecular Biosciences, Northwestern University
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Modulation of the DNA accessibility in the nucleosome -- insights from basic physics.
ORAL
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Presenters
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Alexey Onufriev
- Virginia Tech
Authors
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Alexey Onufriev
- Virginia Tech
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How nucleoid associated proteins stabilize supercoiled DNA
ORAL
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Presenters
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Katelyn Dahlke
- University of Illinois at Urbana-Champaign
Authors
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Katelyn Dahlke
- University of Illinois at Urbana-Champaign
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Charles E. Sing
- University of Illinois at Urbana-Champaign
- Chemical Engineering, University of Illinois at Urbana-Champaign
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