Physics of Genome Organization: From DNA to Chromatin II

Presentations

• Award for Outstanding Doctoral Thesis Research in Biological Physics Talk: Single-stranded nucleic acid elasticity arises from internal electrostatic tension

  COFFEE_KLATCH · Invited

  March 8, 2018, 8:00 AM – March 8, 2018, 8:36 AM

  Authors

  • David Reid Jacobson

    • JILA, National Institute of Standards and Technology and University of Colorado, Boulder

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• Boundary-driven scaling of Turing patterns and bacterial chromosomes

  ORAL

  March 8, 2018, 8:36 AM – March 8, 2018, 8:48 AM

  Presenters

  • Fabai Wu

    • Caltech
    • Division of Geological and Planetary Sciences, Caltech

  Authors

  • Fabai Wu

    • Caltech
    • Division of Geological and Planetary Sciences, Caltech

  • Bas van Schie

    • Kavli Institute of Nanoscience, Delft University of Technology

  • Louis Kuijpers

    • Kavli Institute of Nanoscience, Delft University of Technology

  • Xuan Zheng

    • Kavli Institute of Nanoscience, Delft University of Technology

  • Juan Keymer

    • P. Catholic University Chile

  • Cees Dekker

    • Kavli Institute of Nanoscience, Delft University of Technology

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• Shannon Information Entropy in the Genetic Code

  ORAL

  March 8, 2018, 8:48 AM – March 8, 2018, 9:00 AM

  Presenters

  • Louis Nemzer

    • Chemistry and Physics, Nova Southeastern Univ

  Authors

  • Louis Nemzer

    • Chemistry and Physics, Nova Southeastern Univ

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• Using Self-Assembling DNA Complexes to Examine the Relationship between DNA Organization and Transcriptional Efficiency

  ORAL

  March 8, 2018, 9:00 AM – March 8, 2018, 9:12 AM

  Presenters

  • Dan Nguyen

    • Biomolecular Science & Engineering, Univ of California - Santa Barbara
    • Univ of California - Santa Barbara

  Authors

  • Dan Nguyen

    • Biomolecular Science & Engineering, Univ of California - Santa Barbara
    • Univ of California - Santa Barbara

  • Byoung-jin Jeon

    • Materials and Biomolecular Science & Engineering, Univ. of California - Santa Barbara
    • Univ of California - Santa Barbara
    • Materials, Univ of California - Santa Barbara
    • Polymer Science and Engineering, Univ of Mass - Amherst

  • Omar Saleh

    • Materials and Biomolecular Science & Engineering, Univ. of California - Santa Barbara
    • Univ of California - Santa Barbara
    • Materials and Biomolecular Science & Engineering, Univ of California - Santa Barbara
    • University of California Santa Barbara
    • Materials, University of California

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• Functional Consequences of Methylating the Unmethylated Yeast Genome

  ORAL

  March 8, 2018, 9:12 AM – March 8, 2018, 9:24 AM

  Presenters

  • Alex Finnegan

    • Physics, University of Illinois, Urbana-Champaign
    • Department of Physics and Carl R. Woese Institute for Genomic Biology, University of Illinois, Urbana-Champaign

  Authors

  • Alex Finnegan

    • Physics, University of Illinois, Urbana-Champaign
    • Department of Physics and Carl R. Woese Institute for Genomic Biology, University of Illinois, Urbana-Champaign

  • Hu Jin

    • Physics, University of Illinois, Urbana-Champaign

  • Michael Gapinske

    • Bioengineering, University of Illinois, Urbana-Champaign

  • Wendy Woods

    • Bioengineering, University of Illinois, Urbana-Champaign

  • Pablo Perez-Pinera

    • Bioengineering, University of Illinois, Urbana-Champaign

  • Jun Song

    • Physics, University of Illinois at Urbana-Champaign
    • Physics, University of Illinois, Urbana-Champaign

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• RNA Base Pairing Determines the Conformations of RNA Inside Spherical Viruses

  ORAL

  March 8, 2018, 9:24 AM – March 8, 2018, 9:36 AM

  Presenters

  • Roya Zandi

    • University of California - Riverside
    • Physics, Univ of California - Riverside

  Authors

  • Roya Zandi

    • University of California - Riverside
    • Physics, Univ of California - Riverside

  • Gonca Erdemci-Tandogan

    • Physics, Syracuse University

  • Henri Orland

    • Institut de Physique Théorique, CEA-Saclay

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• DNA sequencing based biophysical characterization of cell-free DNA in the blood circulation sheds light on its origin

  ORAL

  March 8, 2018, 9:36 AM – March 8, 2018, 9:48 AM

  Presenters

  • Philip Burnham

    • Cornell University

  Authors

  • Philip Burnham

    • Cornell University

  • Darshana Dadhania

    • New York Presbyterian - Weill Cornell Medical Center

  • Michael Heyang

    • Cornell University

  • Fanny Chen

    • Cornell University

  • Manikkam Suthanthiran

    • New York Presbyterian - Weill Cornell Medical Center

  • John Lee

    • New York Presbyterian - Weill Cornell Medical Center

  • Iwijn De Vlaminck

    • Cornell University

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• Fundamental Sources of Codon Bias

  ORAL

  March 8, 2018, 9:48 AM – March 8, 2018, 10:00 AM

  Presenters

  • Willow Kion-Crosby

    • Physics & Astronomy, Rutgers the State Univ of NJ New Brunswick
    • Physics & Astronomy, Rutgers, The State University of New Jersey

  Authors

  • Willow Kion-Crosby

    • Physics & Astronomy, Rutgers the State Univ of NJ New Brunswick
    • Physics & Astronomy, Rutgers, The State University of New Jersey

  • Alexandre Morozov

    • Physics & Astronomy, Rutgers the State Univ of NJ New Brunswick
    • Physics & Astronomy, Rutgers, The State University of New Jersey

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• Programmable and Orthogonal Gene Circuit Elements

  ORAL

  March 8, 2018, 10:00 AM – March 8, 2018, 10:12 AM

  Presenters

  • David Specht

    • Cornell Univ

  Authors

  • David Specht

    • Cornell Univ

  • Carla Vidal

    • Cornell Univ

  • Guillaume Lambert

    • Applied and Engineering Physics, Cornell University
    • Cornell University
    • Cornell Univ

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• Dynamics of Active Rouse Chains

  ORAL

  March 8, 2018, 10:12 AM – March 8, 2018, 10:24 AM

  Presenters

  • Dino Osmanovic

    • MIT

  Authors

  • Dino Osmanovic

    • MIT

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• Programmable and bistable CRISPR-based toggle switches in Escherichia coli

  ORAL

  March 8, 2018, 10:24 AM – March 8, 2018, 10:36 AM

  Presenters

  • Yasu Xu

    • Cornell University

  Authors

  • Yasu Xu

    • Cornell University

  • Guillaume Lambert

    • Applied and Engineering Physics, Cornell University
    • Cornell University
    • Cornell Univ

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• Polymer Modeling of Dynamics and Disrupted Organization of Fragmented Chromatin

  ORAL

  March 8, 2018, 10:36 AM – March 8, 2018, 10:48 AM

  Presenters

  • Edward Banigan

    • Institute for Medical Engineering and Science, Massachusetts Institute of Technology
    • Physics, M.I.T>

  Authors

  • Edward Banigan

    • Institute for Medical Engineering and Science, Massachusetts Institute of Technology
    • Physics, M.I.T>

  • Houda Belaghzal

    • Program in Systems Biology, Department of Biochemistry and Molecular Pharmacology, University of Massachusetts Medical School

  • Tyler Borrman

    • Program in Bioinformatics and Integrative Biology, University of Massachusetts Medical School

  • Job Dekker

    • Program in Systems Biology, Department of Biochemistry and Molecular Pharmacology, University of Massachusetts Medical School

  • Leonid Mirny

    • Institute for Medical Engineering and Science, Massachusetts Institute of Technology

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• Evolution of Nested Folding States in Compression of a Strongly Confined Semiflexible Chain

  ORAL

  March 8, 2018, 10:48 AM – March 8, 2018, 11:00 AM

  Presenters

  • Aniket Bhattacharya

    • Physics, Univ of Central Florida

  Authors

  • Aniket Bhattacharya

    • Physics, Univ of Central Florida

  • Walter Reisner

    • Physics, McGill University
    • Physics Department, McGill Univ

  • Simon Bernier

    • Physics, McGill University

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