Systems Biology

Presentations

• Translation Bottlenecks and Bacterial Growth Laws Predict Combined Antibiotic Action

  ORAL

  March 7, 2018, 8:00 AM – March 7, 2018, 8:12 AM

  Presenters

  • Bor Kavcic

    • Institute of Science and Technology Austria

  Authors

  • Bor Kavcic

    • Institute of Science and Technology Austria

  • Tobias Bollenbach

    • University of Cologne

  • Gasper Tkacik

    • Institute of Science and Technology Austria

  View abstract →

• Optimal Structure of Odorant-Receptor Interaction for Effective Olfactory Discrimination

  ORAL

  March 7, 2018, 8:12 AM – March 7, 2018, 8:24 AM

  Presenters

  • Ji Hyun Bak

    • Korea Inst for Advanced Study

  Authors

  • Ji Hyun Bak

    • Korea Inst for Advanced Study

  • Changbong Hyeon

    • Korea Inst for Advanced Study

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• Universal properties of estimating many ligand species concentrations by many cellular receptor types

  ORAL

  March 7, 2018, 8:24 AM – March 7, 2018, 8:36 AM

  Presenters

  • Vijay Singh

    • Department of Physics, Computational Neuroscience Initiative, University of Pennsylvania

  Authors

  • Vijay Singh

    • Department of Physics, Computational Neuroscience Initiative, University of Pennsylvania

  • Ilya Nemenman

    • Emory Univ
    • Emory University
    • Department of Physics, Department of Biology, Emory University

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• Design principles for the optimal arrangement of consecutive enzymes

  ORAL

  March 7, 2018, 8:36 AM – March 7, 2018, 8:48 AM

  Presenters

  • Giovanni Giunta

    • Tech Univ Muenchen

  Authors

  • Giovanni Giunta

    • Tech Univ Muenchen

  • Filipe Tostevin

    • Tech Univ Muenchen

  • Sorin Tanase-Nicola

    • Uppsala Biomedical Center (BMC)

  • Ulrich Gerland

    • Tech Univ Muenchen

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• Modeling metabolic exchange between microalgae and bacteria to test mechanisms of bacteria-mediated biomass enhancement

  ORAL

  March 7, 2018, 8:48 AM – March 7, 2018, 9:00 AM

  Presenters

  • Marc Griesemer

    • Biosciences and Biotechnology Division, Lawrence Livermore National Laboratory

  Authors

  • Marc Griesemer

    • Biosciences and Biotechnology Division, Lawrence Livermore National Laboratory

  • Miriam Windler

    • Civil and Environmental Engineering, Stanford University

  • Jeff Kimbrel

    • Biosciences and Biotechnology Division, Lawrence Livermore National Laboratory

  • Patrik D'haeseleer

    • Global Security Computing Applications Division, Lawrence Livermore National Laboratory

  • Alfred Spormann

    • Civil and Environmental Engineering, Stanford University

  • Xavier Mayali

    • Nuclear and Chemical Division, Lawrence Livermore National Laboratory

  • Ali Navid

    • Biosciences and Biotechnology Division, Lawrence Livermore National Laboratory

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• The Resource Allocation Strategies of <i>E.coli</i> under Different Limitations of Ribosome Synthesis

  ORAL

  March 7, 2018, 9:00 AM – March 7, 2018, 9:12 AM

  Presenters

  • Zhiyuan Li

    • Princeton Center for Theoretical Science, Princeton University

  Authors

  • Zhiyuan Li

    • Princeton Center for Theoretical Science, Princeton University

  • Ned Wingreen

    • Princeton University
    • Molecular Biology, Princeton University
    • Lewis-Sigler Institute, Princeton University
    • Princeton Univ
    • Lewis-Sigler Institute for Integrative Genomics, Princeton University

  • Sophia Hsin-Jung Li

    • Department of Molecular Biology, Princeton University

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• A Quantitative, Genome-Wide Study of Translation Efficiency in <i>E. coli</i>

  ORAL

  March 7, 2018, 9:12 AM – March 7, 2018, 9:24 AM

  Presenters

  • Matteo Mori

    • University of California San Diego

  Authors

  • Matteo Mori

    • University of California San Diego

  • Rohan Balakrishnan

    • University of California San Diego

  • Igor Segota

    • Sanford Burnham Prebys Medical Discovery Institute

  • Zhongge Zhang

    • University of California San Diego

  • Hiroyuki Okano

    • University of California San Diego

  • Christina Ludwig

    • Technical University of Munich

  • Ruedi Aebersold

    • ETH Zurich

  • Terence Hwa

    • University of California San Diego
    • Univ of California - San Diego

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• Target Control in Logical Models using Domain of Influence of nodes

  ORAL

  March 7, 2018, 9:24 AM – March 7, 2018, 9:36 AM

  Presenters

  • Réka Albert

    • Physics, Penn State University
    • Penn State
    • Department of Physics, The Pennsylvania State University
    • Pennsylvania State University
    • Physics, Pennsylvania State Univ

  Authors

  • Gang Yang

    • Physics, Pennsylvania State Univ

  • Réka Albert

    • Physics, Penn State University
    • Penn State
    • Department of Physics, The Pennsylvania State University
    • Pennsylvania State University
    • Physics, Pennsylvania State Univ

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• The dark matter of the human gut microbiome follows neutral ecological assembly rules

  ORAL

  March 7, 2018, 9:36 AM – March 7, 2018, 9:48 AM

  Presenters

  • Patricio Jeraldo

    • Mayo Clinic Found

  Authors

  • Patricio Jeraldo

    • Mayo Clinic Found

  • Lisa Boardman

    • Mayo Clinic Found

  • Bryan White

    • University of Illinois

  • Nigel Goldenfeld

    • Carl R. Woese Institute for Genomic Biology, Department of Physics and Center for the Physics of Living Cells, University of Illinois at Urbana-Champaign
    • Physics, Univ of Illinois - Urbana
    • Physics, University of Illinois at Urbana-Champaign
    • University of Illinois

  • Nicholas Chia

    • Mayo Clinic Found

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• <i>In Silico</i> Analysis of Antibiotic-Induced <i>C. difficile</i> Infection

  ORAL

  March 7, 2018, 9:48 AM – March 7, 2018, 10:00 AM

  Presenters

  • Eric Jones

    • Physics, University of California, Santa Barbara
    • UC Santa Barbara

  Authors

  • Eric Jones

    • Physics, University of California, Santa Barbara
    • UC Santa Barbara

  • Jean Carlson

    • Physics, University of California, Santa Barbara
    • Physics, Univ of California - Santa Barbara

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• Statistical physics of (meta)genomes

  ORAL

  March 7, 2018, 10:00 AM – March 7, 2018, 10:12 AM

  Presenters

  • Jacopo Grilli

    • Santa Fe Institute

  Authors

  • Jacopo Grilli

    • Santa Fe Institute

  • Marco Gherardi

    • Université Pierre et Marie Curie

  • Marco Cosentino Lagomarsino

    • Université Pierre et Marie Curie

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• Dynamics and Optimal Behavioral Strategies of Motile Networks

  ORAL

  March 7, 2018, 10:12 AM – March 7, 2018, 10:24 AM

  Presenters

  • Ingmar Riedel-Kruse

    • Bioengineering, Stanford University
    • Stanford Univ

  Authors

  • Ingmar Riedel-Kruse

    • Bioengineering, Stanford University
    • Stanford Univ

  • Nathan Cira

    • Stanford Univ

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• Long-term growth rate of nonlinear autocatalytic networks

  ORAL

  March 7, 2018, 10:24 AM – March 7, 2018, 10:36 AM

  Presenters

  • Wei-Hsiang Lin

    • Department of Molecular, Cellular and Developmental Biology, Yale University

  Authors

  • Wei-Hsiang Lin

    • Department of Molecular, Cellular and Developmental Biology, Yale University

  • Edo Kussell

    • New York Univ NYU
    • New York University
    • Department of Physics, New York University

  • Christine Jacobs-Wagner

    • Department of Molecular, Cellular and Developmental Biology, Yale University

  View abstract →