Physics of Genome Organization: From DNA to Chromatin I
FOCUS · K49 ·
Presentations
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Nucleosome unwrapping may be easier than you think
Invited
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Presenters
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Ralf Bundschuh
- Departments of Physics, Chemistry&Biochemistry, and Division of Hematology, Ohio State Univ - Columbus
Authors
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Ralf Bundschuh
- Departments of Physics, Chemistry&Biochemistry, and Division of Hematology, Ohio State Univ - Columbus
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Nuclear Architecture Controls the Timescales of Genomic Interactions
ORAL
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Presenters
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Yaojun Zhang
- Princeton Center for Theoretical Science, Princeton University
- Princeton University
Authors
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Yaojun Zhang
- Princeton Center for Theoretical Science, Princeton University
- Princeton University
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Nimish Khanna
- Molecular Biology, University of California San Diego
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Olga Dudko
- Physics, University of California San Diego
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Cornelis Murre
- Molecular Biology, University of California San Diego
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Defect-Facilitated Buckling in Supercoiled DNA
ORAL
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Presenters
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Sumitabha Brahmachari
- Northwestern University
Authors
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Sumitabha Brahmachari
- Northwestern University
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Andrew Dittmore
- National Institutes of Health
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Yasuharu Takagi
- National Institutes of Health
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Keir Neuman
- Natl Inst Health - NIH
- National Institutes of Health
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John Marko
- Biomolecular Sci, Northwestern University
- Physics Dept., Biomolecular Sci., Northwestern University
- Northwestern University
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Modeling Functional Regulation of Gene Expression from Chromatin Profiles
ORAL
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Presenters
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Chongzhi Zang
- University of Virginia
Authors
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Zhenjia Wang
- University of Virginia
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Chongzhi Zang
- University of Virginia
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Properties of Gene Expression and Chromatin Structure with Mechanically Regulated Transcription
ORAL
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Presenters
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Stuart Sevier
- Rice Univ
Authors
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Stuart Sevier
- Rice Univ
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Herbert Levine
- Rice Univ
- Bioengineering, Rice University
- Rice University
- Department of Bioengineering, Rice University
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Uncovering the Relation between Inter-Nucleosome Energetics and Supramolecular Chromatin Structure
ORAL
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Presenters
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Joshua Moller
- Univ of Chicago
- University of Chicago
Authors
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Joshua Moller
- Univ of Chicago
- University of Chicago
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Joshua Lequieu
- Univ of Chicago
- University of California Santa Barbara
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Juan De Pablo
- Institute for Molecular Engineering, The University of Chicago
- Institute for Molecular Engineering, Univ of Chicago
- Institute for molecular engineering, The University of Chicago
- University of Chicago
- Univ of Chicago
- Institute for Molecular Engineering, University of Chicago
- The Institute for Molecular Engineering, The University of Chicago
- Institute of Molecular Engineering, University of Chicago
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Active hydrodynamics of interphase chromatin: coarse-grained modeling and simulations
ORAL
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Presenters
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David Saintillan
- Department of Mechanical and Aerospace Engineering, Univ of California - San Diego
- University of California San Diego
Authors
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David Saintillan
- Department of Mechanical and Aerospace Engineering, Univ of California - San Diego
- University of California San Diego
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Achal Mahajan
- University of California San Diego
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Michael Shelley
- Center for Computational Biology, Simons Foundation; Courant Institute of Mathematical Science, New York University
- New York University
- Courant Institute/Flatiron Institute
- Center for Computational Biology, Flatiron Institute, Simons Foundation
- Flatiron Institute, Simons Foundation
- Center for Computational Biology, Flatiron Institute
- Flatiron Institute
- CCB, Flatiron Institute
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Alexandra Zidovska
- Center for Soft Matter Research, Department of Physics, New York University
- New York University
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Dynamics of Stretched Single DNA and Native Chromatin in Nanoslits
ORAL
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Presenters
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JiaWei Yeh
- Inst of Physics Academia Sinica
Authors
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JiaWei Yeh
- Inst of Physics Academia Sinica
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Kylan Szeto
- Cornell University
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Chia-Fu Chou
- Inst of Physics Academia Sinica
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Jie-Pan Shen
- Inst of Physics Academia Sinica
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A Unified Computational Framework for Modeling Genome-wide Nucleosome Landscape
ORAL
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Presenters
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Hu Jin
- Department of Physics and Carl R. Woese Institute for Genomic Biology, University of Illinois, Urbana-Champaign
Authors
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Hu Jin
- Department of Physics and Carl R. Woese Institute for Genomic Biology, University of Illinois, Urbana-Champaign
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Alex Finnegan
- Physics, University of Illinois, Urbana-Champaign
- Department of Physics and Carl R. Woese Institute for Genomic Biology, University of Illinois, Urbana-Champaign
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Jun Song
- Department of Physics and Carl R. Woese Institute for Genomic Biology, University of Illinois, Urbana-Champaign
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Dynamic Force-Extension of DNA with Nucleoid Associated Proteins
ORAL
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Presenters
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Katelyn Dahlke
- Univ of Illinois - Urbana
Authors
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Katelyn Dahlke
- Univ of Illinois - Urbana
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Charles Sing
- Univ of Illinois - Urbana
- University of Illinois at Urbana-Champaign
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Structure and Dynamics of Histone-DNA Phase Separated Liquid Droplets
ORAL
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Presenters
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Anisha Shakya
- Center for Soft and Living Matter, Institute for Basic Science
- Center for Soft and Living Matter, Institute of Basic Science, Ulsan Natl Inst of Sci & Tech
Authors
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Anisha Shakya
- Center for Soft and Living Matter, Institute for Basic Science
- Center for Soft and Living Matter, Institute of Basic Science, Ulsan Natl Inst of Sci & Tech
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John King
- Center for Soft and Living Matter, Institute for Basic Science
- Center for Soft and Living Matter, Institute of Basic Science, Ulsan Natl Inst of Sci & Tech
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Unexpected Discontinuous Supercoiling of Torsionally Buckled DNA: Evidence for a Solenoid?
ORAL
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Presenters
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Andrew Dittmore
- Natl Inst Health - NIH
Authors
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Andrew Dittmore
- Natl Inst Health - NIH
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Keir Neuman
- Natl Inst Health - NIH
- National Institutes of Health
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