Polymer Physics in Very Strongly Confined Environments I : Knots and Nanopores

Presentations

• Break - Dillon Medal Talk

  March 6, 2018, 2:30 PM – March 6, 2018, 3:06 PM

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• Anomalous Dynamics of a Polymer Chain Confined in a Static Porous Environment

  ORAL

  March 6, 2018, 3:06 PM – March 6, 2018, 3:18 PM

  Presenters

  • Zachary Dell

    • Polymer Science and Engineering, University of Massachusetts - Amherst

  Authors

  • Zachary Dell

    • Polymer Science and Engineering, University of Massachusetts - Amherst

  • Murugappan Muthukumar

    • Polymer Science and Engineering, University of Massachusetts
    • Polymer Science and Engineering, Univ of Mass - Amherst
    • Polymer Science & Engineering, Univ of Mass - Amherst
    • Polymer Science and Engineering, University of Massachusetts - Amherst

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• Polymer folding in confined and crowded environments

  ORAL

  March 6, 2018, 3:18 PM – March 6, 2018, 3:30 PM

  Presenters

  • Mark Taylor

    • Physics, Hiram College

  Authors

  • Mark Taylor

    • Physics, Hiram College

  • Christopher Vinci

    • Physics, Hiram College

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• Sequence-dependent persistence length of long DNA

  ORAL

  March 6, 2018, 3:30 PM – March 6, 2018, 3:42 PM

  Presenters

  • Hui-Min Chuang

    • Department of Chemical Engineering and Material Science, University of Minnesota

  Authors

  • Hui-Min Chuang

    • Department of Chemical Engineering and Material Science, University of Minnesota

  • Jeffrey Reifenberger

    • BioNano Genomics

  • Cao Han

    • BioNano Genomics

  • Kevin Dorfman

    • Chemical Engineering and Materials Science, Univ of Minn - Minneapolis
    • Department of Chemical Engineering and Material Science, University of Minnesota
    • Chemical Engineering and Materials Science, University of Minnesota - Twin Cities
    • Department of Chemical Engineering and Materials Science, University of Minnesota

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• DNA knots in confinement

  Invited

  March 6, 2018, 3:42 PM – March 6, 2018, 4:18 PM

  Presenters

  • Patrick Doyle

    • Department of Chemical Engineering, Massachusetts Institute of Technology
    • Massachusetts Institute of Technology
    • Chemical Engineering, Massachusetts Institute of Technology; BioSyM IRG, SMART Centre, Singapore
    • Chemical Engineering, Massachusetts Inst of Tech-MIT

  Authors

  • Patrick Doyle

    • Department of Chemical Engineering, Massachusetts Institute of Technology
    • Massachusetts Institute of Technology
    • Chemical Engineering, Massachusetts Institute of Technology; BioSyM IRG, SMART Centre, Singapore
    • Chemical Engineering, Massachusetts Inst of Tech-MIT

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• Prevalence of loose and tight knots in DNA investigated by a nanopore sensor

  ORAL

  March 6, 2018, 4:18 PM – March 6, 2018, 4:30 PM

  Presenters

  • Rajesh Sharma

    • Biomedical Engineering and BioSyM IRG, SMART Centre, National University of Singapore

  Authors

  • Rajesh Sharma

    • Biomedical Engineering and BioSyM IRG, SMART Centre, National University of Singapore

  • Ishita Agrawal

    • Biomedical Engineering, National University of Singapore

  • Liang Dai

    • BioSyM IRG, SMART Centre, Singapore

  • Patrick Doyle

    • Department of Chemical Engineering, Massachusetts Institute of Technology
    • Massachusetts Institute of Technology
    • Chemical Engineering, Massachusetts Institute of Technology; BioSyM IRG, SMART Centre, Singapore
    • Chemical Engineering, Massachusetts Inst of Tech-MIT

  • Slaven Garaj

    • Physics, Biomedical Engineering and CA2DM, National University of Singapore; BioSyM IRG, SMART Centre, Singapore

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• Translation and untying of DNA knots in extensional fields

  ORAL

  March 6, 2018, 4:30 PM – March 6, 2018, 4:42 PM

  Presenters

  • Alexander Klotz

    • Department of Chemical Engineering, Massachusetts Institute of Technology
    • Massachusetts Institute of Technology

  Authors

  • Alexander Klotz

    • Department of Chemical Engineering, Massachusetts Institute of Technology
    • Massachusetts Institute of Technology

  • Beatrice Soh

    • Department of Chemical Engineering, Massachusetts Institute of Technology
    • Massachusetts Institute of Technology

  • Vivek Narsimhan

    • Department of Chemical Engineering, Purdue University
    • Purdue University

  • Patrick Doyle

    • Department of Chemical Engineering, Massachusetts Institute of Technology
    • Massachusetts Institute of Technology
    • Chemical Engineering, Massachusetts Institute of Technology; BioSyM IRG, SMART Centre, Singapore
    • Chemical Engineering, Massachusetts Inst of Tech-MIT

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• Fabricating sub 5 nm nanopores via tip-controlled electric breakdown using an atomic force microscope

  ORAL

  March 6, 2018, 4:42 PM – March 6, 2018, 4:54 PM

  Presenters

  • Walter Reisner

    • Physics, McGill University
    • Physics Department, McGill Univ

  Authors

  • Yuning Zhang

    • Physics, McGill University
    • Physics Department, McGill Univ
    • Physics, McGill University (contributed equally)

  • Yoichi Miyahara

    • Physics, McGill University (contributed equally)
    • McGill Univ

  • Peter Grutter

    • Department of Physics, McGill University
    • Physics, McGill University
    • McGill Univ

  • Walter Reisner

    • Physics, McGill University
    • Physics Department, McGill Univ

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• Different solid-state nanopore translocation dynamics and times of dsDNA and ssDNA

  ORAL

  March 6, 2018, 4:54 PM – March 6, 2018, 5:06 PM

  Presenters

  • Sebastian Sensale

    • University of Notre Dame

  Authors

  • Sebastian Sensale

    • University of Notre Dame

  • Ceming Wang

    • University of Notre Dame

  • Zhangli Peng

    • University of Notre Dame

  • Hsueh-Chia Chang

    • University of Notre Dame

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• Effects of nanopore charge decorations on the translocation dynamics of DNA

  ORAL

  March 6, 2018, 5:06 PM – March 6, 2018, 5:18 PM

  Presenters

  • Ining Jou

    • Polymer Science & Engineering, Univ of Mass - Amherst

  Authors

  • Ining Jou

    • Polymer Science & Engineering, Univ of Mass - Amherst

  • Murugappan Muthukumar

    • Polymer Science and Engineering, University of Massachusetts
    • Polymer Science and Engineering, Univ of Mass - Amherst
    • Polymer Science & Engineering, Univ of Mass - Amherst
    • Polymer Science and Engineering, University of Massachusetts - Amherst

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• Unfolding of RNA via Translocation Through a Nanopore

  ORAL

  March 6, 2018, 5:18 PM – March 6, 2018, 5:30 PM

  Presenters

  • Sadhana Chalise

    • Polymer Science and Engineering, Univ of Mass - Amherst

  Authors

  • Sadhana Chalise

    • Polymer Science and Engineering, Univ of Mass - Amherst

  • Murugappan Muthukumar

    • Polymer Science and Engineering, University of Massachusetts
    • Polymer Science and Engineering, Univ of Mass - Amherst
    • Polymer Science & Engineering, Univ of Mass - Amherst
    • Polymer Science and Engineering, University of Massachusetts - Amherst

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