Architecture of Allosteric Materials and Principles for Optimal Cooperativity

ORAL

Abstract

Allostery, a long-range mediated interaction, is a key feature in the functionality of several proteins, resulting to be crucial for life. Understanding the nature of the information transmitted and the architectures optimising such transmission remains a challenge. We recently introduced a numerical scheme to evolve functional materials that can accomplish a specific task. Architectures optimised to be cooperative, which propagate efficiently energy, strongly differ from previously investigated materials optimised to propagate strain. Although we observe a large diversity of functioning cooperative architectures —including shear, hinge and twist designs, they all obey the same principle of displaying a mechanism, i.e. an extended and nearly zero energy mode. We compute its optimal frequency, and show that —for such designs— cooperativity decays logarithmically with the system size L for d=2 and does not decay for d=3 where d is the spatial dimension, in great contrast with undesigned materials for which cooperativity decays as L-d. Overall, our approach leads to a natural explanation for several observations in allosteric proteins, and suggests a path to discover new ones, also viewing allostery as a consequence of design in disordered media.

Presenters

  • Riccardo Ravasio

    • Institute of Physics, Swiss Fed Inst Tech

Authors

  • Le Yan

    • Kavli Institute for Theoretical Physics, University of California - Santa Barbara
    • Kavli Institute for Theoretical Physics
    • Kavli Institute of Theoretical Physics, UCSB
  • Riccardo Ravasio

    • Institute of Physics, Swiss Fed Inst Tech
  • Carolina Brito

    • Physics, Universidade Federal do Rio Grande do Sul
    • Department of Physics, Universidade Federal do Rio Grande do Sul
  • Matthieu Wyart

    • Physics, Ecole Polytechnique Federale de Lausanne
    • Institute of Physics, Swiss Fed Inst Tech