Machine Learning for Modeling and Control of Biological Systems I

Presentations

• Dynamic control and model inference of signal activated gene regulation

  COFFEE_KLATCH · Invited

  March 16, 2017, 11:15 AM – March 16, 2017, 11:51 AM

  Authors

  • Gregor Neuert

    • Vanderbilt University

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• Controllability of energy landscapes by varying correlations between minima

  ORAL

  March 16, 2017, 11:51 AM – March 16, 2017, 12:03 PM

  Authors

  • Sai Teja Pusuluri

    • Department of Physics and Astronomy \& NQPI, Ohio University

  • Alex H. Lang

    • Salk Institute

  • Pankaj Mehta

    • Boston University

  • Horacio E. Castillo

    • Department of Physics and Astronomy \& NQPI, Ohio University

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• PCA meets RG

  ORAL

  March 16, 2017, 12:03 PM – March 16, 2017, 12:15 PM

  Authors

  • Serena Bradde

    • CUNY/UPENN

  • William Bialek

    • Princeton University/CUNY
    • Princeton University

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• Inferring phenomenological models for dynamics of Purkinje neurons

  ORAL

  March 16, 2017, 12:15 PM – March 16, 2017, 12:27 PM

  Authors

  • Catalina Rivera

    • Department of Physics, Emory University

  • David Hofmann

    • Emory Univ
    • Emory University
    • Department of Physics, Emory University

  • Ilya Nemenman

    • Emory University
    • Department of Physics and Biology, Emory University
    • Department of Physics, Emory University

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• Imaging localized force displacements in cells and tissues from substrate displacements

  ORAL

  March 16, 2017, 12:27 PM – March 16, 2017, 12:39 PM

  Authors

  • Joshua Chang

    • Natl Inst of Health - NIH

  • Tom Chou

    • University of California Los Angeles

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• Multichannel microformulators for massively parallel machine learning and automated design of biological experiments

  ORAL

  March 16, 2017, 12:39 PM – March 16, 2017, 12:51 PM

  Authors

  • John Wikswo

    • Vanderbilt University
    • Vanderbilt Univ

  • Aditya Kolli

    • AstraZeneca

  • Harish Shankaran

    • AstraZeneca

  • Matthew Wagoner

    • AstraZeneca

  • Jerome Mettetal

    • AstraZeneca

  • Ronald Reiserer

    • Vanderbilt Univ

  • Gregory Gerken

    • Vanderbilt Univ

  • Clayton Britt

    • Vanderbilt Univ

  • David Schaffer

    • Vanderbilt Univ

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• Discovering fine structure in big biological data

  ORAL

  March 16, 2017, 12:51 PM – March 16, 2017, 1:03 PM

  Authors

  • Alexandre Day

    • Boston University

  • Pankaj Mehta

    • Boston University
    • Department of Physics, Boston University
    • Physics Department, Boston University

  • Amir Erez

    • National Institute of Health

  • Grégoire Altan-Bonnet

    • National Institute of Health

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• Identifying mechanisms for superdiffusive dynamics in cell trajectories

  ORAL

  March 16, 2017, 1:03 PM – March 16, 2017, 1:15 PM

  Authors

  • Giuseppe Passucci

    • Syracuse University

  • Megan Brasch

    • Syracuse University

  • James Henderson

    • Syracuse University

  • M Lisa Manning

    • Syracuse University

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• Using Maximum Entropy to Find Patterns in Genomes

  ORAL

  March 16, 2017, 1:15 PM – March 16, 2017, 1:27 PM

  Authors

  • Sophia Liu

    • Northwestern Univ

  • Adam Hockenberry

    • Northwestern Univ

  • Andrea Lancichinetti

    • Northwestern Univ

  • Michael Jewett

    • Northwestern Univ

  • Luis Amaral

    • Northwestern Univ

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• An experimental-computational platform for investigating microbial interactions and dynamics in communities with two codependent species

  ORAL

  March 16, 2017, 1:27 PM – March 16, 2017, 1:39 PM

  Authors

  • Miguel Fuentes-Cabrera

    • Oak Ridge National Lab
    • Center for Nanophase Materials Sciences, Oak Ridge National Laboratory

  • John D. Anderson

    • University of Tennessee

  • Jared Wilmoth

    • Oak Ridge National Lab

  • Marta Ginovart

    • Polytechnic University of Catalonia

  • Clara Prats

    • Polytechnic University of Catalonia

  • Xavier Portell-Canal

    • French National Institute for Agricultural Research

  • Scott Retterer

    • Oak Ridge National Lab

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• Inference for single molecules

  COFFEE_KLATCH · Invited

  March 16, 2017, 1:39 PM – March 16, 2017, 2:15 PM

  Authors

  • Steve Presse

    • Arizona State University

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