Physics of Genome Organization: from DNA to Chromatin I

Presentations

• New insights into chromatin folding and dynamics from multi-scale modeling

  COFFEE_KLATCH · Invited

  March 17, 2016, 8:00 AM – March 17, 2016, 8:36 AM

  Authors

  • Wilma Olson

    • Rutgers, the State University of New Jersey

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• Mitotic chromosome compaction via active loop extrusion.

  ORAL

  March 17, 2016, 8:36 AM – March 17, 2016, 8:48 AM

  Authors

  • Anton Goloborodko

    • Massachusetts Inst of Tech-MIT

  • Maxim Imakaev

    • Massachusetts Inst of Tech-MIT

  • John Marko

    • Departments of Physics \& Astronomy and Molecular Biosciences, Northwestern University
    • Northwestern University

  • Leonid Mirny

    • MIT
    • Massachusetts Inst of Tech-MIT

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• Multiscale modeling of three-dimensional genome

  ORAL

  March 17, 2016, 8:48 AM – March 17, 2016, 9:00 AM

  Authors

  • Bin Zhang

    • Rice University

  • Peter Wolynes

    • Rice University

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• The universality of nucleosome organization: from yeast to human

  ORAL

  March 17, 2016, 9:00 AM – March 17, 2016, 9:12 AM

  Authors

  • Razvan Chereji

    • NIH

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• Elucidate Chromatin Folding at the Mesoscale

  ORAL

  March 17, 2016, 9:12 AM – March 17, 2016, 9:24 AM

  Authors

  • Xiangyun Qiu

    • The George Washington University
    • George Washington Univ
    • Geroge Washington University, Washington DC

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• Formation of chromosomal domains in interphase by loop extrusion

  ORAL

  March 17, 2016, 9:24 AM – March 17, 2016, 9:36 AM

  Authors

  • Geoffrey Fudenberg

    • MIT

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• TBA

  COFFEE_KLATCH · Invited

  March 17, 2016, 9:36 AM – March 17, 2016, 10:12 AM

  Authors

  • Xiaowei Zhuang

    • Harvard Univ

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• Predictive Computational Modeling of Chromatin Folding

  ORAL

  March 17, 2016, 10:12 AM – March 17, 2016, 10:24 AM

  Authors

  • Miichele Di Pierro

    • Center for Theoretical Biological Physics, Rice University

  • Bin Zhang

    • Center for Theoretical Biological Physics, Rice University

  • Peter J. Wolynes

    • Center for Theoretical Biological Physics, Rice University

  • Jose N. Onuchic

    • Center for Theoretical Biological Physics, Rice University

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• Robustness of nucleosome patterns in the presence of DNA sequence-specific free energy landscapes and active remodeling

  ORAL

  March 17, 2016, 10:24 AM – March 17, 2016, 10:36 AM

  Authors

  • Johannes Nuebler

    • Physik-Department, Technische Universität München

  • Benedikt Obermayer

    • Max-Delbrück-Center for Molecular Medicine

  • Wolfram Möbius

    • Max-Delbrück-Center for Molecular Medicine

  • Michael Wolff

    • Physik-Department, Technische Universität München

  • Ulrich Gerland

    • Physik-Department, Technische Universität München
    • Technische Universität München

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• The role of Nucleosome Positions on Chromatin Structure: A multi-scale approach

  ORAL

  March 17, 2016, 10:36 AM – March 17, 2016, 10:48 AM

  Authors

  • Joshua Lequieu

    • University of Chicago

  • Andres Cordoba

    • University of Chicago

  • Juan de Pablo

    • The University of Chicago, Institute for Molecular Engineering
    • Institute for Molecular Engineering, University of Chicago
    • University of Chicago
    • IME, UChicago
    • Institute for Molecular Engineering. University of Chicago. Argonne National Laboratory.
    • Univ of Chicago

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• Chromatin extrusion explains key features of loop and domain formation in wild-type and engineered genomes

  ORAL

  March 17, 2016, 10:48 AM – March 17, 2016, 11:00 AM

  Authors

  • Adrian Sanborn

    • Stanford

  • Suhas Rao

    • Stanford

  • Su-Chen Huang

    • Baylor College of Medicine

  • Neva Durand

    • Baylor College of Medicine

  • Miriam Huntley

    • Baylor College of Medicine

  • Andrew Jewett

    • Baylor College of Medicine

  • Ivan Bochkov

    • Baylor College of Medicine

  • Dharmaraj Chinnappan

    • Baylor College of Medicine

  • Ashok Cutkosky

    • Baylor College of Medicine

  • Jian Li

    • Baylor College of Medicine

  • Kristopher Geeting

    • Baylor College of Medicine

  • Doug McKenna

    • Baylor College of Medicine

  • Elena Stamenova

    • Baylor College of Medicine

  • Andreas Gnirke

    • Broad Institute

  • Alexandre Melnikov

    • Broad Institute

  • Eric Lander

    • Broad Institute

  • Erez Aiden

    • Baylor College of Medicine

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