Biopolymers in Confinement: I

Presentations

• Flory theory or the two state cooperativity model: What describes backfolding of DNA in nanotubes?

  ORAL

  March 14, 2016, 2:30 PM – March 14, 2016, 2:42 PM

  Authors

  • Kevin Dorfman

    • University of Minnesota
    • Department of Chemical Engineering and Materials Science, University of Minnesota
    • University of Minnesota - Twin cities
    • University of Minnesota - Minneapolis
    • Dept. Chemical Engineering and Materials Science, University of Minnesota - Twin Cities
    • Univ of Minn - Minneapolis
    • Univ of Minnesota - Twin Cities

  • Abhiram Muraldihar

    • Department of Chemical Engineering and Materials Science, University of Minnesota
    • Univ of Minn - Minneapolis

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• Pore translocation of polymer chains with physical knots

  ORAL

  March 14, 2016, 2:42 PM – March 14, 2016, 2:54 PM

  Authors

  • Antonio Suma

    • SISSA, International School for Advanced Studies, via Bonomea 265, I-34136 Trieste, Italy

  • Angelo Rosa

    • SISSA, International School for Advanced Studies, via Bonomea 265, I-34136 Trieste, Italy

  • Cristian Micheletti

    • SISSA, International School for Advanced Studies, via Bonomea 265, I-34136 Trieste, Italy

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• Intramolecular Fluctuation of DNA in Nanochannels via High-throughput Video Microscopy

  ORAL

  March 14, 2016, 2:54 PM – March 14, 2016, 3:06 PM

  Authors

  • Julian Sheats

    • Univ of Minn - Minneapolis

  • Jeffrey G. Reifenberger

    • BioNano Genomics - San Diego

  • Han Cao

    • BioNano Genomics - San Diego

  • Kevin D. Dorfman

    • Univ of Minn - Minneapolis

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• Non-Equilibrium Dynamics of Nano-channel Confined DNA: A Brownian Dynamics Simulation Study

  ORAL

  March 14, 2016, 3:06 PM – March 14, 2016, 3:18 PM

  Authors

  • Aniket Bhattacharya

    • University of Central Florida

  • Aiqun Huang

    • University of Central Florida

  • Walter Reisner

    • Department of Physics- McGill University
    • McGill University
    • McGill University, Canada

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• Dynamics of topological events within single molecules of DNA confined in nanochannels.

  ORAL

  March 14, 2016, 3:18 PM – March 14, 2016, 3:30 PM

  Authors

  • Jeffrey Reifenberger

    • BioNano Genomics

  • Kevin Dorfman

    • University of Minnesota
    • Department of Chemical Engineering and Materials Science, University of Minnesota
    • University of Minnesota - Twin cities
    • University of Minnesota - Minneapolis
    • Dept. Chemical Engineering and Materials Science, University of Minnesota - Twin Cities
    • Univ of Minn - Minneapolis
    • Univ of Minnesota - Twin Cities

  • Han Cao

    • BioNano Genomics

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• Adsorption of annealed branched polymers on curved surfaces

  ORAL

  March 14, 2016, 3:30 PM – March 14, 2016, 3:42 PM

  Authors

  • Jef Wagner

    • Lawrence University

  • Gonca Erdemci-Tandogan

    • University of California Riverside

  • Roya Zandi

    • University of California,riverside
    • University of California Riverside

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• Depletion forces in collapsing a flexible chain molecule in a confined or free space

  ORAL

  March 14, 2016, 3:42 PM – March 14, 2016, 3:54 PM

  Authors

  • Chanil Jeon

    • University of Waterloo

  • Bae-Yeun Ha

    • University of Waterloo

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• Detection of ATP hydrolysis through motion of nanoconfined DNA

  ORAL

  March 14, 2016, 3:54 PM – March 14, 2016, 4:06 PM

  Authors

  • Maedeh Roushan

    • North Carolina State University

  • Gideon Livshits

    • North Carolina State University

  • Zubair Azad

    • North Carolina State University

  • Hong Wang

    • North Carolina State University

  • Robert Riehn

    • North Carolina State University

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• Stochastic resonance during a polymer translocation process

  ORAL

  March 14, 2016, 4:06 PM – March 14, 2016, 4:18 PM

  Authors

  • Debasish Mondal

    • University of Massachusetts Amherst

  • Murugappan Muthukumar

    • University of Massachusetts Amherst
    • Department of Polymer Science and Engineering, University of Massachusetts at Amherst, Amherst MA 01003
    • University of Massachusetts

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• Strongly Non-equilibrium Dynamics of Nanochannel Confined DNA

  COFFEE_KLATCH · Invited

  March 14, 2016, 4:18 PM – March 14, 2016, 4:54 PM

  Authors

  • Walter Reisner

    • Department of Physics- McGill University
    • McGill University
    • McGill University, Canada

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• Role of small ion dynamics in driven translocation of polyelectrolytes through nanopores

  ORAL

  March 14, 2016, 4:54 PM – March 14, 2016, 5:06 PM

  Authors

  • Harshwardhan Katkar

    • University of Massachusetts Amherst

  • Murugappan Muthukumar

    • University of Massachusetts Amherst
    • Department of Polymer Science and Engineering, University of Massachusetts at Amherst, Amherst MA 01003
    • University of Massachusetts

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• Free Energy of a Polymer in Slit-Like Confinement across the Odijk, moderate confinement, and Bulk Regimes

  ORAL

  March 14, 2016, 5:06 PM – March 14, 2016, 5:18 PM

  Authors

  • Albert Kamanzi

    • McGill University

  • Jason S. Leith

    • McGill University

  • David Sean

    • University of Ottawa

  • Daniel Berard

    • McGill University

  • Andrew C. Guthrie

    • McGill University

  • Christopher M.J. McFaul

    • McGill University

  • Gary W. Slater

    • University of Ottawa

  • Hendrick W. de Haan

    • University of Ontario, Institute of Technology

  • Sabrina R. Leslie

    • McGill University

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• Do Ions Flow Freely Through Confined DNA?

  ORAL

  March 14, 2016, 5:18 PM – March 14, 2016, 5:30 PM

  Authors

  • Zubair Azad

    • North Carolina State University

  • Robert Riehn

    • North Carolina State University

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