Focus Session: Conformations and Dynamics of Biopolymers III

Presentations

• Non-Gaussian Distribution of DNA Barcode Extension In Nanochannels Using High-throughput Imaging

  ORAL

  March 5, 2015, 2:30 PM – March 5, 2015, 2:42 PM

  Authors

  • Julian Sheats

    • Chemical Engineering and Materials Science, University of Minnesota, Minneapolis MN, USA

  • Wesley Reinhart

    • Chemical Engineering and Materials Science, University of Minnesota, Minneapolis MN, USA

  • Jeff Reifenberger

    • BioNano Genomics, San Diego, CA, USA

  • Damini Gupta

    • Chemical Engineering and Materials Science, University of Minnesota, Minneapolis MN, USA

  • Abhiram Muralidhar

    • Chemical Engineering and Materials Science, University of Minnesota, Minneapolis MN, USA

  • Han Cao

    • BioNano Genomics, San Diego, CA, USA

  • Kevin Dorfman

    • Chemical Engineering and Materials Science, University of Minnesota, Minneapolis MN, USA

  View abstract →

• Simulation of Microtubules: Mechanical properties

  ORAL

  March 5, 2015, 2:42 PM – March 5, 2015, 2:54 PM

  Authors

  • Mark J. Stevens

    • Sandia National Labs
    • Sandia National Laboratories

  View abstract →

• Small-angle neutron and X-ray scattering reveal conformational changes in rhodopsin activation

  ORAL

  March 5, 2015, 2:54 PM – March 5, 2015, 3:06 PM

  Authors

  • Utsab R. Shrestha

    • Wayne State University, MI

  • Debsindhu Bhowmik

    • Wayne State University, MI

  • Suchitrhanga M.C.D. Perera

    • University of Arizona, AZ

  • Udeep Chawla

    • University of Arizona, AZ

  • Andrey V. Struts

    • University of Arizona, AZ

  • Vito Graziono

    • Brookhaven National Laboratory, NY

  • Sai Venkatesh Pingali

    • Oak Ridge National Laboratory, TN

  • William T. Heller

    • Oak Ridge National Laboratory, TN

  • Shuo Qian

    • Oak Ridge National Laboratory, TN

  • Michael F. Brown

    • University of Arizona, AZ

  • Xiang-Qiang Chu

    • Wayne State University, MI

  View abstract →

• Effects of Uniaxial Strain on Shear Moduli of Semiflexible Polymer Networks

  COFFEE_KLATCH · Invited

  March 5, 2015, 3:06 PM – March 5, 2015, 3:42 PM

  Authors

  • Paul Janmey

    • University of Pennsylvania

  View abstract →

• Emergence of attraction in simulations of coarse-grained double stranded DNA

  ORAL

  March 5, 2015, 3:42 PM – March 5, 2015, 3:54 PM

  Authors

  • Shahzad Ghanbarian

    • University of British Colombia

  • J\"{o}rg Rottler

    • University of British Colombia
    • The University of British Columnbia

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• Capturing Transition Paths and Transition States for Conformational Rearrangements in the Ribosome

  ORAL

  March 5, 2015, 3:54 PM – March 5, 2015, 4:06 PM

  Authors

  • Jeffrey Noel

    • Center for Theoretical Biological Physics Rice University
    • Rice University
    • Center for Theoretical Biological Physics, Rice University

  • Jorge Chahine

    • Universidade Estadual Paulista, Rio Preto, Brazil

  • Vitor Leite

    • Universidade Estadual Paulista, Rio Preto, Brazil

  • Paul Whitford

    • Physics Dept Northeastern Univ
    • Department of Physics, Northeastern University

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• Study on the stability of the DNA hairpin d(ATCCAT-GTTA-TAGGAT) employing molecular dynamics simulation

  ORAL

  March 5, 2015, 4:06 PM – March 5, 2015, 4:18 PM

  Authors

  • Sangwook Wu

    • Department of Physics, Pukyong National University,Busan 608-737, Korea

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• Effect of solvent viscosity on driven translocation of a semi-flexible polymer through a nanopore

  ORAL

  March 5, 2015, 4:18 PM – March 5, 2015, 4:30 PM

  Authors

  • Ramesh Adhikari

    • University of Central Florida

  • Aniket Bhattacharya

    • University of Central Florida

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• Spontaneous curvature in chiral polar filaments near interfaces

  ORAL

  March 5, 2015, 4:30 PM – March 5, 2015, 4:42 PM

  Authors

  • Peter D. Olmsted

    • Department of Physics, Georgetown University

  • Emily E. Riley

    • Department of Applied Mathematics and Theoretical Physics, Cambridge University

  • Sophia Jordens

    • Department of Health Sciences \& Technology, Laboratory of Food \& Soft Materials, ETH Zurich

  • Ivan Usov

    • Department of Health Sciences \& Technology, Laboratory of Food \& Soft Materials, ETH Zurich

  • Lucio Isa

    • Department of Materials, Laboratory for Surface Science \& Technology, ETH Zurich

  • Raffaele Mezzenga

    • Department of Health Sciences \& Technology, Laboratory of Food \& Soft Materials, ETH Zurich
    • ETH Zurich

  View abstract →

• Adsorption of Helical Polymers on a Substrate

  ORAL

  March 5, 2015, 4:42 PM – March 5, 2015, 4:54 PM

  Authors

  • Matthew Williams

    • Univ of Georgia

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• ABSTRACT WITHDRAWN

  March 5, 2015, 4:54 PM – March 5, 2015, 5:06 PM

  View abstract →

• Elasticity of 3D networks with rigid filaments and compliant crosslinks

  ORAL

  March 5, 2015, 5:06 PM – March 5, 2015, 5:18 PM

  Authors

  • Knut M. Heidemann

    • Institute for Numerical and Applied Mathematics, Georg-August-Universit{\"a}t, G{\"o}ttingen, Germany

  • Abhinav Sharma

    • Third Institute of Physics --- Biophysics, Georg-August-Universit{\"a}t, G{\"o}ttingen, Germany

  • Florian Rehfeldt

    • Third Institute of Physics --- Biophysics, Georg-August-Universit{\"a}t, G{\"o}ttingen, Germany

  • Christopher Schmidt

    • Third Institute of Physics --- Biophysics, Georg-August-Universit{\"a}t, G{\"o}ttingen, Germany
    • Georg-August-Universitaet Goettingen, Third Institute of Physics - Biophysics
    • University of Goettingen

  • Max Wardetzky

    • Institute for Numerical and Applied Mathematics, Georg-August-Universit{\"a}t, G{\"o}ttingen, Germany

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• Molecular Dynamics Investigations of the alpha-helix to Beta-barrel Conformational Transformation in RfaH

  ORAL

  March 5, 2015, 5:18 PM – March 5, 2015, 5:30 PM

  Authors

  • Jeevan GC

    • Florida International University

  • Yuba Bhandari

    • Florida International University

  • Bernard Gerstman

    • Florida International University

  • Prem Chapagain

    • Florida International University

  View abstract →