Biological Networks and System Biology

Presentations

• Self-Organization of Networks Via Synchrony-Dependent Plasticity

  ORAL

  March 16, 2006, 2:30 PM – March 16, 2006, 2:42 PM

  Authors

  • Jack Waddell

  • Michal Zochowski

    • University of Michigan
    • Department of Physics, Biophysics Research Division, University of Michigan
    • University of Michigan - Physics

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• Phase reduction analysis of coupled neural oscillators: application to epileptic seizure dynamics

  ORAL

  March 16, 2006, 2:42 PM – March 16, 2006, 2:54 PM

  Authors

  • Daisuke Takeshita

    • University of Missouri at St. Louis

  • Yasuomi Sato

    • J.W. Goethe-University

  • Sonya Bahar

    • University of Missouri at St. Louis

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• Effect of Delays and Network Topology in Spatiotemporal Pattern Formation

  ORAL

  March 16, 2006, 2:54 PM – March 16, 2006, 3:06 PM

  Authors

  • Rhonda Dzakpasu

  • Michal Zochowski

    • University of Michigan
    • Department of Physics, Biophysics Research Division, University of Michigan
    • University of Michigan - Physics

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• Inhibitory Synaptic Coupling and Spatiotemporal Synchrony in a Neural Model

  ORAL

  March 16, 2006, 3:06 PM – March 16, 2006, 3:18 PM

  Authors

  • Roxana Contreras

    • University of Missouri-Saint Louis

  • Sonya Bahar

    • University of Missouri-Saint Louis

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• Attentional modulation of stimulus competition in a large scale model of the visual pathway

  ORAL

  March 16, 2006, 3:18 PM – March 16, 2006, 3:30 PM

  Authors

  • Calin Buia

    • University of North Carolina at Chapel Hill

  • Paul Tiesinga

    • University of North Carolina at Chapel Hill

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• Specificity, promiscuity, and the structure of complex information processing networks

  ORAL

  March 16, 2006, 3:30 PM – March 16, 2006, 3:42 PM

  Authors

  • Christopher Myers

    • Theory Center, Cornell
    • Cornell University

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• Modeling of signal transduction in bacterial quorum-sensing

  ORAL

  March 16, 2006, 3:42 PM – March 16, 2006, 3:54 PM

  Authors

  • Andrew Fenley

    • Virginia Tech
    • Virginia Tech (Physics Dept.)

  • Suman Banik

    • Virginia Tech

  • Rahul Kulkarni

    • Virginia Tech

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• Sloppiness is universal in systems biology: making predictions nonetheless

  ORAL

  March 16, 2006, 3:54 PM – March 16, 2006, 4:06 PM

  Authors

  • Ryan Gutenkunst

    • Physics, Cornell

  • Fergal Casey

    • Applied Math, Cornell

  • Joshua Waterfall

    • Physics, Cornell

  • Kevin Brown

    • Molecular and Cellular Biology, Harvard

  • Christopher Myers

    • Theory Center, Cornell
    • Cornell University

  • James Sethna

    • Physics, Cornell
    • Physics Department, Cornell University

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• Inference and analysis of gene-regulatory networks in the bacterium B.subtilis

  ORAL

  March 16, 2006, 4:06 PM – March 16, 2006, 4:18 PM

  Authors

  • Claire Christensen

    • Dept. of Physics, Penn State University

  • Anshuman Gupta

    • Dept. Chem. E., Penn State University

  • Reka Albert

    • Dept. of Physics, Penn State University

  • Costas Maranas

    • Dept. Chem. E., Penn State University

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• Sensitivity-based approach to optimal experimental design in a receptor trafficking and down regulation model

  ORAL

  March 16, 2006, 4:18 PM – March 16, 2006, 4:30 PM

  Authors

  • Fergal Casey

  • Joshua Waterfall

  • Ryan Gutenkunst

    • Cornell University

  • Kevin Brown

    • Harvard University

  • Christopher Myers

  • James Sethna

    • Cornell University

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• Stochasticity in the Expression of LamB and its Affect on $\lambda $ phage Infection

  ORAL

  March 16, 2006, 4:30 PM – March 16, 2006, 4:42 PM

  Authors

  • Emily Chapman

  • Xiao-lun Wu

    • University of Pittsburgh
    • Department of Physics and Astronomy, University of Pittsburgh, Pittsburgh, PA 15260

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• Control of lineage stability and its role in resolving cell fates

  ORAL

  March 16, 2006, 4:42 PM – March 16, 2006, 4:54 PM

  Authors

  • Aryeh Warmflash

    • University of Chicago

  • Aaron Dinner

    • University of Chicago

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• Role of finite-size fragments in analysis of DNA replication

  ORAL

  March 16, 2006, 4:54 PM – March 16, 2006, 5:06 PM

  Authors

  • John Bechhoefer

  • Haiyang Zhang

    • Dept. of Physics, Simon Fraser University

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• Stochastic dynamics of macromolecular-assembly networks.

  ORAL

  March 16, 2006, 5:06 PM – March 16, 2006, 5:18 PM

  Authors

  • Leonor Saiz

    • Memorial Sloan-Kettering Cancer Center

  • Jose Vilar

    • Memorial Sloan-Kettering Cancer Center

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• Selective advantage for sexual reproduction

  ORAL

  March 16, 2006, 5:18 PM – March 16, 2006, 5:30 PM

  Authors

  • Emmanuel Tannenbaum

    • Ben-Gurion University of the Negev

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