Biochemical and Genetic Networks

Presentations

• Understanding and Improving Massively Parallel DNA Detectors for Biomedical Assays

  ORAL

  March 22, 2005, 8:15 AM – March 22, 2005, 8:27 AM

  Authors

  • Benjamin Smith

  • Richard Yeh

  • Jason Carpentier

  • Steven Rodriguez

  • Shannon Guiles

  • David Lin

  • Carl Franck

    • Cornell University

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• Label-less Fluorescence-based Detection for DNA Microarray

  ORAL

  March 22, 2005, 8:27 AM – March 22, 2005, 8:39 AM

  Authors

  • Sanjun Niu

  • Gaurav Singh

  • Ravi Saraf

    • University of Nebraska - Lincoln

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• Label-free optical detection of biochemical reactions in microarray format

  ORAL

  March 22, 2005, 8:39 AM – March 22, 2005, 8:51 AM

  Authors

  • J. P. Landry

    • Department of Physics, University of California at Davis

  • X. D. Zhu

    • Department of Physics, University of California at Davis

  • J. P. Gregg

    • Department of Pathology, University of California, Davis School of Medicine

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• Identifying pattern in microarray expression series using algorithmic information theory

  ORAL

  March 22, 2005, 8:51 AM – March 22, 2005, 9:03 AM

  Authors

  • Sebastian Ahnert

    • University of Cambridge, UK

  • Karen Willbrand

    • Ecole des Mines de Paris, Fontainebleau, France

  • Francis Brown

    • Ecole Normale Superieure, Paris, France

  • Thomas Fink

    • Insitiut Curie, Paris, France

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• Microarray Studies of Arabidopsis Gene Response to High Magnetic Fields.

  ORAL

  March 22, 2005, 9:03 AM – March 22, 2005, 9:15 AM

  Authors

  • J. Ch. Davis

  • M.W. Meisel

    • Dept. Physics and NHMFL, Univ. Florida

  • J.S. Brooks

    • Dept. Physics and NHMFL, Florida State Univ.

  • A.-L. Paul

  • R.J. Ferl

    • Dept. Hort. Sci., Univ. Florida

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• Using mutual information to infer gene-gene interactions from microarray expression series

  ORAL

  March 22, 2005, 9:15 AM – March 22, 2005, 9:27 AM

  Authors

  • Thomas Fink

    • Bioinformatics, Institut Curie

  • Sebastian Ahnert

    • University of Cambridge

  • Francois Radvanyi

    • Institut Curie

  • Nicolas Stransky

    • Institut Curie

  • Karen Willbrand

    • Ecole des Mines de Paris

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• Quantifying optimal accuracy of local primary sequence bioinformatics methods

  ORAL

  March 22, 2005, 9:27 AM – March 22, 2005, 9:39 AM

  Authors

  • Daniel Aalberts

  • Eric Daub

  • Jesse Dill

    • Williams College

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• Evolution at the Nucleotide Level

  ORAL

  March 22, 2005, 9:39 AM – March 22, 2005, 9:51 AM

  Authors

  • Jose Parra

  • Bernard Gerstman

    • Department of Physics, Florida International University, 33199
    • Department of Physics, Florida International University, Miami FL 33199
    • Department of Physics, Florida International University, Miami, FL 33199

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• An entropic tool for genome analysis

  ORAL

  March 22, 2005, 9:51 AM – March 22, 2005, 10:03 AM

  Authors

  • Chih-Yuan Tseng

    • Dept. of Physics, National Central University
    • Computational Biology and Bio-informatics Lab, Physics Dept., National Central Univ.

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• Nonlinear degradation and the function of genetic circuits

  ORAL

  March 22, 2005, 10:03 AM – March 22, 2005, 10:15 AM

  Authors

  • Nicolas Buchler

    • Rockefeller University

  • Ulrich Gerland

    • Ludwig-Maximilians University

  • Terence Hwa

    • University of California, San Diego

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• Topological units of environmental signal processing in the transcriptional-regulatory network of Escherichia coli

  ORAL

  March 22, 2005, 10:15 AM – March 22, 2005, 10:27 AM

  Authors

  • Gabor Balazsi

    • Northwestern University Medical School

  • Albert-Laszlo Barabasi

    • University of Notre Dame

  • Zoltan Oltvai

    • Northwestern University Medical School

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• Power law rank-abundance relationships in marine phage populations

  ORAL

  March 22, 2005, 10:27 AM – March 22, 2005, 10:39 AM

  Authors

  • Peter Salamon

    • San Diego State University

  • Karl Heinz Hoffmann

    • Technical University of Chemnitz

  • Beltran Rodriguez-Brito

  • Mya Breitbart

  • David Bangor

  • Florent Angly

  • Ben Felts

  • James Nulton

  • Forest Rohwer

    • San Diego State University

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• Biological Networks: Does Function Follow Form?

  ORAL

  March 22, 2005, 10:39 AM – March 22, 2005, 10:51 AM

  Authors

  • Etay Ziv

    • College of Physicians \& Surgeons, Department of Biomedical Engineering, Columbia University

  • Manuel Middendorf

    • Department of Physics, Columbia University
    • Columbia University, Department of Physics

  • Ilya Nemenman

    • Coulmbia University
    • Center for Computational Biology and Bioinformatics, Columbia University

  • Chris Wiggins

    • Applied Physics and Applied Mathematics, Center for Computational Biology and Bioinformatics, Columbia University

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• Analysis of a yeast cell cycle model

  ORAL

  March 22, 2005, 10:51 AM – March 22, 2005, 11:03 AM

  Authors

  • Chao Tang

    • NEC Labs America

  • Ying Lu

    • Rockefeller University

  • Fangting Li

  • Qi Ouyang

  • Mingyuan Zhong

    • Peking University

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• Self-Consistent Proteomic Field Theory of Stochastic Gene Switches

  ORAL

  March 22, 2005, 11:03 AM – March 22, 2005, 11:15 AM

  Authors

  • Aleksandra M. Walczak

    • UCSD

  • Masaki Sasai

    • Nagoya University

  • Peter G. Wolynes

    • UCSD

  View abstract →